SubtiBank SubtiBank
Version comparison:

2018-02-09T21:55:16.000Z2025-05-28 21:16:47

locus

BSU36400

BSU_36400

geneLength

810

813

ec

outlinks

bsu

BSU36400

BSU_36400

Gene

Coordinates

3,746,279 → 3,747,091

3,746,279 3,747,091

Gene

Phenotypes of a mutant

lack of [[protein|SigD]]-dependent gene expression (no ''[[gene|hag]]'' expression), no motility [Pubmed|22730131]

lack of [[protein|SigD]]-dependent gene expression (no ''[[gene|hag]]'' expression), no motility [Pubmed|22730131]

defective in swarming and flagellar assembly [pubmed|30201778]

The protein

Protein family

flagella basal body rod proteins family (according to Swiss-Prot)

[SW|Flagella basal body rod proteins family] (according to UniProt)

The protein

Paralogous protein(s)

[[protein|FlgE]], [[protein|FlhP]]

[[this]]

The protein

[SW|Localization]

extracellular (no signal peptide) [Pubmed|18957862]

extracellular (no signal peptide) [Pubmed|18957862]

flagellum hook (according to UniProt)

Biological materials

Mutant

BKE36400 (Δ[[gene|flhO]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATTTCCCACCTCTAAAA, downstream forward: _UP4_TAAGAAAACGGAAGAAAAAA

BKK36400 (Δ[[gene|flhO]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATTTCCCACCTCTAAAA, downstream forward: _UP4_TAAGAAAACGGAAGAAAAAA

BKE36400 ([[gene|flhO]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATTTCCCACCTCTAAAA, downstream forward: _UP4_TAAGAAAACGGAAGAAAAAA

BKK36400 ([[gene|flhO]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATTTCCCACCTCTAAAA, downstream forward: _UP4_TAAGAAAACGGAAGAAAAAA

References

Original publications

18957862, 9023218, 7836311, 15033535

18957862, 9023218, 7836311, 15033535, 30201778, 27811912

The protein

Structure

[PDB|5JXL] (from Campylobacter jejuni, 30% identity) [pubmed|27811912]